This directory contains 6 GWAS results files from the stage 1 GWAS described in Francis et al. 

The stage 1 GWAS files are g-zipped and comma separated, output from BOLT-LMM. 

The column headers are as follows:

SNP: raid
CHR: chromosome
BP: chromosomal position
Genpos: unused in this data
ALLELE1: effect allele
ALLELE0: non-effect allele
A1FREQ: effect allele frequency
INFO: info score for SNP
CHISQ_LINREG: chi-squared statistic from standard linear regression at SNP
P_LINREG: p value from standard linear regression at SNP
BETA: effect size
SE: Standard error
CHI_SQ_BOLT_LMM_INF: chi-squared statistic from infinitesimal mixed model association
P_BOLT_LMM_INF: p value (unadjusted) from infinitesimal mixed model association
CHI_SQ_BOLT_LMM: chi-squared statistic from standard mixed model association
P_BOLT_LMM: p value (unadjusted) from standard mixed model association